miRBase entry: ptr-mir-618

Stem-loop ptr-mir-618


Accession
MI0008817
Description
Pan troglodytes ptr-mir-618 precursor miRNA
Gene family
MIPF0000553; mir-618

Literature search
1 open access papers mention ptr-mir-618
(1 sentences)

Sequence

cucuuguucacagccAAACUCUACUUGUCCUUCUGAGUguaauuacguacaugcaguagcucaggagacaagcaggguuacccuguggaugagucug
..(((((((((((...((((((.((((((.((((((((.....(((.........))))))))))))))))).))))))...)))))))))))....

Structure
--cu           ccA      A      C        guaau   gua 
    cuuguucacag   AACUCU CUUGUC UUCUGAGU     uac   c
    |||||||||||   |||||| |||||| ||||||||     |||   a
    gaguagguguc   uuggga gaacag aggacucg     aug   u
gucu           cca      c      -        -----   acg 


Annotation confidence Not enough data
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Genome context
chr12: 83353624-83353720 [-]

Database links

Mature ptr-miR-618

Accession MIMAT0008280
Description Pan troglodytes ptr-miR-618 mature miRNA
Sequence 16 - AAACUCUACUUGUCCUUCUGAGU - 38
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70