miRBase entry: ptr-mir-622

Stem-loop ptr-mir-622


Accession
MI0008820
Description
Pan troglodytes ptr-mir-622 precursor miRNA
Gene family
MIPF0000619; mir-622


Sequence

gagaagcuggacaaguauuggucucagcagauugaagagagcaccacaguggucaucacACAGUCUGCUGAGGUUGGAGCugcuaagaugacgcu
.((.((((.(((..........((((((((((((..((((.(((....))).)).))...)))))))))))))))..)))).))...........

Structure
----------g  a    -g   aaguauuggu            -aa  -  g   c 
           ag agcu  gac          cucagcagauug   ga ga cac a
           || ||||  |||          ||||||||||||   || || |||  
           uc uCGA  UUG          GAGUCGUCUGAC   cu cu gug c
ucgcaguagaa  g    GG   ----------            Aca  a  g   a 


Annotation confidence Not enough data
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Genome context
chr13: 75834020-75834114 [+]

Database links

Mature ptr-miR-622

Accession MIMAT0008283
Description Pan troglodytes ptr-miR-622 mature miRNA
Sequence 60 - ACAGUCUGCUGAGGUUGGAGC - 80
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70