miRBase entry: ptr-mir-626

Stem-loop ptr-mir-626


Accession
MI0008822
Description
Pan troglodytes ptr-mir-626 precursor miRNA
Gene family
MIPF0000474; mir-626


Sequence

cugauauauuugucuuauuugagagcugaggaguauuuuuaugcaaucugaaugaucucAGCUGUCUGAAAAUGUCUUcaauuuuaaaggcuu
...........(((((...(((((..((((((.((((((((.(((..((((......)))).))).)))))))))))))).))))))))))..

Structure
cugauauauuu     auu     gc      g        u   au    au 
           gucuu   ugaga  ugagga uauuuuua gca  cuga  g
           |||||   |||||  |||||| |||||||| |||  ||||   
           cggaa   auuuu  acUUCU GUAAAAGU UGU  GAcu  a
---------uu     ---     -a      -        C   -C    cu 


Annotation confidence Not enough data
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Genome context
chr15: 22231936-22232028 [+]

Database links

Mature ptr-miR-626

Accession MIMAT0008285
Description Pan troglodytes ptr-miR-626 mature miRNA
Sequence 60 - AGCUGUCUGAAAAUGUCUU - 78
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70