miRBase entry: ptr-mir-627

Stem-loop ptr-mir-627


Accession
MI0008823
Description
Pan troglodytes ptr-mir-627 precursor miRNA
Gene family
MIPF0000550; mir-627


Sequence

uacuuauuacugguaGUGAGUCUCUAAGAAAAGAGGAggugguuguuuuccuccucuuuucuuugagacucacuaccaauaauaagaaauacuacu
..(((((((.((((((((((((((.((((((((((((((.((....)).)))))))))))))).)))))))))))))).)))))))..........

Structure
--------ua       c              U              u  u 
          cuuauua ugguaGUGAGUCUC AAGAAAAGAGGAgg gg u
          ||||||| |||||||||||||| |||||||||||||| ||  
          gaauaau accaucacucagag uucuuuucuccucc uu g
ucaucauaaa       a              u              u  u 


Annotation confidence Not enough data
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Genome context
chr15: 22754236-22754331 [-]

Database links

Mature ptr-miR-627

Accession MIMAT0008286
Description Pan troglodytes ptr-miR-627 mature miRNA
Sequence 16 - GUGAGUCUCUAAGAAAAGAGGA - 37
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70