miRBase entry: ptr-mir-640

Stem-loop ptr-mir-640


Accession
MI0008831
Description
Pan troglodytes ptr-mir-640 precursor miRNA
Gene family
MIPF0000494; mir-640


Sequence

ugacccugggcaaguuccugaagaucagacacaucagaucccuuaucuguaaaaugggcAUGAUCCAGGAACCUGCCUCUacaguugccuugggg
...(((.(((((((((((((..(((((....((((((((.....)))))....)))....))))))))))))............)))))).))).

Structure
uga   u      ------------       aa     gaca   ----     c 
   ccc gggcaa            guuccug  gauca    cau    cagau c
   ||| ||||||            |||||||  |||||    |||    ||||| c
   ggg uccguu            CAAGGAC  CUAGU    gua    gucua u
--g   u      gacaUCUCCGUC       --     Acgg   aaau     u 


Annotation confidence Not enough data
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Genome context
chr19: 20552253-20552347 [+]

Database links

Mature ptr-miR-640

Accession MIMAT0008294
Description Pan troglodytes ptr-miR-640 mature miRNA
Sequence 60 - AUGAUCCAGGAACCUGCCUCU - 80
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70