miRBase entry: ptr-mir-641

Stem-loop ptr-mir-641


Accession
MI0008832
Description
Pan troglodytes ptr-mir-641 precursor miRNA
Gene family
MIPF0000679; mir-641


Sequence

ugggugaaaggaaggAAAGACAUAGGAUAGAGUCACCccuguccucuguccuccaccuauagaggugacuguccugugucuuuccuuccucuuacccc
.((((((.((((((((((((((((((((..(((((((.((((....((.....))...)))).))))))))))))))))))))))))))).)))))).

Structure
u      a                    AG       c    ccuc  u 
 ggguga aggaaggAAAGACAUAGGAU  AGUCACC cugu    ug c
 |||||| ||||||||||||||||||||  ||||||| ||||    || c
 cccauu uccuuccuuucuguguccug  ucagugg gaua    ac u
c      c                    --       a    -ucc  c 


Annotation confidence Not enough data
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Genome context
chr19: 42318377-42318474 [-]

Database links

Mature ptr-miR-641

Accession MIMAT0008295
Description Pan troglodytes ptr-miR-641 mature miRNA
Sequence 16 - AAAGACAUAGGAUAGAGUCACC - 37
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70