miRBase entry: ptr-mir-642

Stem-loop ptr-mir-642


Accession
MI0008833
Description
Pan troglodytes ptr-mir-642 precursor miRNA
Gene family
MIPF0000468; mir-642


Sequence

ucugaguugggaggGUCCCUCUCCAAAUGUGUCUUGgggugggggaucaagacacauuuggagagggaaccucccaacucggccucugccaucauu
...(((((((((((.((((((((((((((((((((((.........)))))))))))))))))))))).)))))))))))(((....)))......

Structure
-------------ucu           G                      ggu 
                gaguugggagg UCCCUCUCCAAAUGUGUCUUGg   g
                ||||||||||| ||||||||||||||||||||||   g
                cucaacccucc agggagagguuuacacagaacu   g
uuacuaccgucuccgg           a                      agg 


Annotation confidence Not enough data
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Genome context
chr19: 47788459-47788554 [+]

Database links

Mature ptr-miR-642

Accession MIMAT0008296
Description Pan troglodytes ptr-miR-642 mature miRNA
Sequence 15 - GUCCCUCUCCAAAUGUGUCUUG - 36
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70