miRBase entry: ptr-mir-650

Stem-loop ptr-mir-650


Accession
MI0008838
Description
Pan troglodytes ptr-mir-650 precursor miRNA
Gene family
MIPF0000457; mir-650


Sequence

agugcuggggucuuAGGAGGCAGCGCUCUCAGGACgucaccaccauggccagggcucugcuccuccucacccuccucacucagggcacaggugau
.((((((((((...(((((((((.(((((..((.(((.......))).))))))).))))..))))).)))))..........))))).......

Structure
------a     ----------     cuu     --    C     CA  A   ca 
       gugcu          ggggu   AGGAG  GCAG GCUCU  GG Cgu  c
       |||||          |||||   |||||  |||| |||||  || |||  c
       cacgg          uccca   uccuc  cguc cggga  cc gua  a
uagugga     gacucacucc     --c     cu    u     --  g   cc 


Annotation confidence Not enough data
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Genome context
chr22: 8895031-8895125 [+]

Database links

Mature ptr-miR-650

Accession MIMAT0008301
Description Pan troglodytes ptr-miR-650 mature miRNA
Sequence 15 - AGGAGGCAGCGCUCUCAGGAC - 35
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70