miRBase entry: ptr-mir-652

Stem-loop ptr-mir-652


Accession
MI0008839
Description
Pan troglodytes ptr-mir-652 precursor miRNA
Gene family
MIPF0000333; mir-652


Sequence

cgaauggcuaugcacugcacaacccuaggagagggugccauucacauagacuauaauugAAUGGCGCCACUAGGGUUGUGcagugcacaaccuacac
.....((...((((((((((((((((((.....(((((((((((..((.....))..))))))))))).))))))))))))))))))...)).....

Structure
cgaau  cua                  gagag           ca  g 
     gg   ugcacugcacaacccuag     ggugccauuca  ua a
     ||   ||||||||||||||||||     |||||||||||  || c
     cc   acgugacGUGUUGGGAUC     CCGCGGUAAgu  au u
cacau  aac                  ----A           ua  a 


Annotation confidence Not enough data
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Genome context
chrX: 109699194-109699290 [+]

Database links

Mature ptr-miR-652

Accession MIMAT0008302
Description Pan troglodytes ptr-miR-652 mature miRNA
Sequence 60 - AAUGGCGCCACUAGGGUUGUG - 80
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70