miRBase entry: ptr-mir-653

Stem-loop ptr-mir-653


Accession
MI0008840
Description
Pan troglodytes ptr-mir-653 precursor miRNA
Gene family
MIPF0000435; mir-653


Sequence

uucauuccuucaGUGUUGAAACAAUCUCUACUGaaccagcuucaaacaaguucacuggaguuuguuucaauauugcaagaaugauaagauggaag
.((((((...((((((((((((((.(((((.(((((.............))))).))))).))))))))))))))...))))))...........

Structure
----------u      cuu              U     C     cagcu 
           ucauuc   caGUGUUGAAACAA CUCUA UGaac     u
           ||||||   |||||||||||||| ||||| |||||     c
           aguaag   guuauaacuuuguu gaggu acuug     a
gaagguagaau      aac              u     c     aacaa 


Annotation confidence Not enough data
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Genome context
chr7: 96352356-96352450 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ptr-mir-653
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-653

Accession MIMAT0008303
Description Pan troglodytes ptr-miR-653 mature miRNA
Sequence 13 - GUGUUGAAACAAUCUCUACUG - 33
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70