miRBase entry: ptr-mir-663a

Stem-loop ptr-mir-663a


Accession
MI0008846
Description
Pan troglodytes ptr-mir-663a precursor miRNA
Gene family
MIPF0000462; mir-663


Sequence

ccuuccggcaucccAGGCGGGGCGCCGCGGGACCGCccucgugucuguggcggugggaucccgcggccguguuuuccugguggcccggccau
....((((..(((((((.((.(((((((((((((((((........).))))).....)))))))).))).))..))))).)).))))....

Structure
ccuu    ca  -     -C  G   -        -----     - ucg 
    ccgg  uc ccAGG  GG GCG CCGCGGGA     CCGCc c   u
    ||||  || |||||  || ||| ||||||||     ||||| |    
    ggcc  gg ggucc  uu ugc ggcgcccu     ggcgg g   g
uacc    -c  u     uu  g   c        agggu     u ucu 


Annotation confidence Not enough data
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Genome context
chr20: 30127384-30127475 [-]

Database links

Mature ptr-miR-663a

Accession MIMAT0008309
Description Pan troglodytes ptr-miR-663a mature miRNA
Sequence 15 - AGGCGGGGCGCCGCGGGACCGC - 36
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70