miRBase entry: ptr-mir-663b

Stem-loop ptr-mir-663b


Accession
MI0008847
Description
Pan troglodytes ptr-mir-663b precursor miRNA
Gene family
MIPF0000462; mir-663


Sequence

ggugccgagggccguccggcauccuaggcgggucgcugugggaccgcccucgugucuguggcggugggauccuguggccguguuuuccuGGUGGCCCGGCCGUGCCUGAGGuuu
...(((..((((((.((((..(((((((((((((((...((((((((((........).))))))....))).)))))).))....))))).)).)))).)).))))..)))..

Structure
ggu   ga    -  u    ca  -     ----  -      ugu   ----      - ucg 
   gcc  gggc cg ccgg  uc cuagg    cg ggucgc   ggg    accgcc c   u
   |||  |||| || ||||  || |||||    || ||||||   |||    |||||| |    
   uGG  UCCG GC GGCC  GG GGucc    gu ccggug   ccu    uggcgg g   g
-uu   AG    U  C    -C  U     uuuu  g      --u   aggg      u ucu 


Annotation confidence Not enough data
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Genome context
chr20: 31150978-31151091 [-]

Database links

Mature ptr-miR-663b

Accession MIMAT0008310
Description Pan troglodytes ptr-miR-663b mature miRNA
Sequence 90 - GGUGGCCCGGCCGUGCCUGAGG - 111
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70