miRBase entry: ptr-mir-668

Stem-loop ptr-mir-668


Accession
MI0008850
Description
Pan troglodytes ptr-mir-668 precursor miRNA
Gene family
MIPF0000357; mir-668


Sequence

guaagugcgccucgggugagcaugcacuuaauguggguguaUGUCACUCGGCUCGGCCCACUACc
...((((.(((((((((((.((((((((((...))))))))))))))))))...))).))))...

Structure
gua    c   ---        g          a 
   agug gcc   ucggguga caugcacuua  
   |||| |||   |||||||| |||||||||| u
   UCAC CGG   GGCUCACU GUaugugggu  
cCA    C   CUC        -          g 


Annotation confidence Not enough data
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Genome context
chr14: 86303493-86303557 [+]
Clustered miRNAs
14 other miRNAs are < 10 kb from ptr-mir-668
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-668

Accession MIMAT0008313
Description Pan troglodytes ptr-miR-668 mature miRNA
Sequence 42 - UGUCACUCGGCUCGGCCCACUAC - 64
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70