miRBase entry: ptr-mir-671

Stem-loop ptr-mir-671


Accession
MI0008851
Description
Pan troglodytes ptr-mir-671 precursor miRNA
Gene family
MIPF0000358; mir-671


Sequence

caggugaacuggcaggccaggaagaggaggaagcccuggaggggcuggaggugauggauguuuuccUCCGGUUCUCAGGGCUCCACCucuuucgggccguagagccagggcuggugc
(((.....(((((.((((.((((((((.(((.((((((..(((((((((((.((.......)).)))))))))))))))))))).)))))))).)))).....)))))..)))....

Structure
----   gugaa     ----a    a        a   a      ga           u  ug 
    cag     cuggc     ggcc ggaagagg gga gcccug  ggggcuggagg ga  g
    |||     |||||     |||| |||||||| ||| ||||||  ||||||||||| ||  a
    guc     gaccg     ccgg cuuucuCC CCU CGGGAC  UCUUGGCCUcc uu  u
cgug   ---gg     agaug    g        A   -      --           u  ug 


Annotation confidence Not enough data
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Genome context
chr7: 155489074-155489190 [+]

Database links

Mature ptr-miR-671

Accession MIMAT0008314
Description Pan troglodytes ptr-miR-671 mature miRNA
Sequence 67 - UCCGGUUCUCAGGGCUCCACC - 87
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70