miRBase entry: ptr-mir-708

Stem-loop ptr-mir-708


Accession
MI0008852
Description
Pan troglodytes ptr-mir-708 precursor miRNA
Gene family
MIPF0000397; mir-708


Sequence

aacugcccucAAGGAGCUUACAAUCUAGCUGGGgguaaaugacuugcacaugaacacaacuagacugugagcuucuagagggcaggg
..((((((((.(((((((((((.(((((.((...((..(((.......)))..)).)).))))).))))))))))).))))))))..

Structure
aa        A           A     C  GGg  aa   ac 
  cugcccuc AGGAGCUUACA UCUAG UG   gu  aug  u
  |||||||| ||||||||||| ||||| ||   ||  |||  u
  gacgggag ucuucgagugu agauc ac   ca  uac  g
gg        a           c     a  --a  ag   ac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr11: 79477418-79477504 [-]

Database links

Mature ptr-miR-708

Accession MIMAT0008315
Description Pan troglodytes ptr-miR-708 mature miRNA
Sequence 11 - AAGGAGCUUACAAUCUAGCUGGG - 33
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70