miRBase entry: ptr-mir-873

Stem-loop ptr-mir-873


Accession
MI0008863
Description
Pan troglodytes ptr-mir-873 precursor miRNA
Gene family
MIPF0000390; mir-873


Sequence

gugugcauuuGCAGGAACUUGUGAGUCUCCUauugaaaaugaacaggagacugaugaguucccgggaacacccaca
(((.(..(((.(.(((((((((.((((((((.((.......)).)))))))).))))))))).).)))..).))).

Structure
-   u ca   G A         G        a  ga 
 gug g  uuu C GGAACUUGU AGUCUCCU uu  a
 ||| |  ||| | ||||||||| |||||||| ||  a
 cac c  aag g ccuugagua ucagagga aa  a
a   c ac   g c         g        c  gu 


Annotation confidence Not enough data
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Genome context
chr9: 29474515-29474590 [-]

Database links

Mature ptr-miR-873

Accession MIMAT0008324
Description Pan troglodytes ptr-miR-873 mature miRNA
Sequence 11 - GCAGGAACUUGUGAGUCUCCU - 31
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70