miRBase entry: ptr-mir-874

Stem-loop ptr-mir-874


Accession
MI0008864
Description
Pan troglodytes ptr-mir-874 precursor miRNA
Gene family
MIPF0000401; mir-874


Sequence

uuagcccugcggccccacgcaccaggguaagagagacucucgcuucCUGCCCUGGCCCGAGGGACCGAcuggcuggg
((((((...(((.(((.((..((((((((((.(((...))).))...))))))))..)).))).)))...)))))).

Structure
-      cug   c   a  ca        ---  a   a 
 uuagcc   cgg ccc cg  ccagggua   ag gag  
 ||||||   ||| ||| ||  ||||||||   || ||| c
 ggucgg   GCC GGG GC  GGUCCCGU   uc cuc  
g      ucA   A   A  CC        Ccu  g   u 


Annotation confidence Not enough data
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Genome context
chr5: 137645227-137645303 [-]

Database links

Mature ptr-miR-874

Accession MIMAT0008325
Description Pan troglodytes ptr-miR-874 mature miRNA
Sequence 47 - CUGCCCUGGCCCGAGGGACCGA - 68
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70