miRBase entry: ptr-mir-885

Stem-loop ptr-mir-885


Accession
MI0008867
Description
Pan troglodytes ptr-mir-885 precursor miRNA
Gene family
MIPF0000532; mir-885


Sequence

ccgcacucucuccauuacacuacccugccucuucuccaugagAGGCAGCGGGGUGUAGUGGAUAgagcacggg
(((..((((.(((((((((((.(((((((((((......))))))))).))))))))))))).))))..))).

Structure
-   ca    c           a  -         cu 
 ccg  cucu uccauuacacu cc cugccucuu  c
 |||  |||| ||||||||||| || |||||||||   
 ggc  gagA AGGUGAUGUGG GG GACGGAgag  c
g   ac    U           -  C         ua 


Annotation confidence Not enough data
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Genome context
chr3: 10665673-10665745 [-]

Database links

Mature ptr-miR-885

Accession MIMAT0008328
Description Pan troglodytes ptr-miR-885 mature miRNA
Sequence 43 - AGGCAGCGGGGUGUAGUGGAUA - 64
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70