miRBase entry: ptr-mir-887

Stem-loop ptr-mir-887


Accession
MI0008869
Description
Pan troglodytes ptr-mir-887 precursor miRNA
Gene family
MIPF0000554; mir-887


Sequence

ugcagauccuugggagcccuguuagacucuggauuuuacacuuggaGUGAACGGGCGCCAUCCCGAGGcuuugcacag
((((((.((((((((((((((((..(((((((.........))))))).)))))).))..)))))))).))))))...

Structure
---      u        --  -      ag       auu 
   ugcaga ccuuggga  gc ccuguu  acucugg   u
   |||||| ||||||||  || ||||||  |||||||   u
   acguuu GGAGCCCU  CG GGGCAA  UGagguu   a
gac      c        AC  C      -G       cac 


Annotation confidence Not enough data
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Genome context
chr5: 16254571-16254648 [+]

Database links

Mature ptr-miR-887

Accession MIMAT0008330
Description Pan troglodytes ptr-miR-887 mature miRNA
Sequence 47 - GUGAACGGGCGCCAUCCCGAGG - 68
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70