miRBase entry: ptr-mir-891b

Stem-loop ptr-mir-891b


Accession
MI0008873
Description
Pan troglodytes ptr-mir-891b precursor miRNA
Gene family
MIPF0000420; mir-891


Sequence

ccuuaauccuUGCAACUUACCUGAGUCAUUGAuucaguaaaacauucaauggcacauguuuguugugagggucaaaag
.....(((((((((((..((.((.((((((((.............)))))))).)).))..)))))))))))......

Structure
-ccuua           UU  C  A        uucag 
      auccuUGCAAC  AC UG GUCAUUGA     u
      |||||||||||  || || ||||||||     a
      ugggaguguug  ug ac cgguaacu     a
gaaaac           uu  u  a        uacaa 


Annotation confidence Not enough data
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Genome context
chrX: 145727507-145727584 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from ptr-mir-891b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-891b

Accession MIMAT0008334
Description Pan troglodytes ptr-miR-891b mature miRNA
Sequence 11 - UGCAACUUACCUGAGUCAUUGA - 32
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70