miRBase entry: ptr-mir-935

Stem-loop ptr-mir-935


Accession
MI0008882
Description
Pan troglodytes ptr-mir-935 precursor miRNA
Gene family
MIPF0000606; mir-935


Sequence

gcgggggcgcgggcggcaguggcgggagcggccccucggccauccuccgucugcCCAGUUACCGCUUCCGCUACCGCcgccgcucccgcu
((((((((...((((((.(((((((((((((...((.(((............))).))...))))))))))))).)))))))))))))).

Structure
-        gcg      a             ccc  c   caucc 
 gcgggggc   ggcggc guggcgggagcgg   cu ggc     u
 ||||||||   |||||| |||||||||||||   || |||      
 cgcccucg   ccgcCG CAUCGCCUUCGCC   GA Ccg     c
u        ---      C             AUU  C   ucugc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr19: 56344761-56344850 [+]

Database links

Mature ptr-miR-935

Accession MIMAT0008342
Description Pan troglodytes ptr-miR-935 mature miRNA
Sequence 55 - CCAGUUACCGCUUCCGCUACCGC - 77
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70