miRBase entry: ptr-mir-938

Stem-loop ptr-mir-938


Accession
MI0008885
Description
Pan troglodytes ptr-mir-938 precursor miRNA
Gene family
MIPF0000469; mir-938


Sequence

gaagguguaccaugUGCCCUUAAAGGUGAACCCAGUguaccuucaugaaccaugguacaccuuuaagaacuugguaugccu
..((((((((((.((...((((((((((.(((..(((...(.....)...)))))).)))))))))).)).))))))))))

Structure
ga          u  GCC          A   CA   uac u 
  agguguacca gU   CUUAAAGGUG ACC  GUg   c u
  |||||||||| ||   |||||||||| |||  |||   | c
  uccguauggu ca   gaauuuccac ugg  uac   g a
--          u  --a          a   --   caa u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr10: 30591934-30592014 [-]

Database links

Mature ptr-miR-938

Accession MIMAT0008345
Description Pan troglodytes ptr-miR-938 mature miRNA
Sequence 15 - UGCCCUUAAAGGUGAACCCAGU - 36
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70