miRBase entry: ptr-mir-943

Stem-loop ptr-mir-943


Accession
MI0008889
Description
Pan troglodytes ptr-mir-943 precursor miRNA
Gene family
MIPF0000690; mir-943


Sequence

gggacguucugggcucagagggggugggggacguuugccggucacugcugcuggcgccCUGACUGUUGCCGUCCUCCAGccccacucaaaggcaucc
...........(.((..((((((((((((((((...((((((((.((((...))))...))))))..))))))))))).)))).)))..)).)....

Structure
gggacguucug g  ca   -    -         uuu  --      --c    g 
           g cu  gag gggg ugggggacg   gc  cgguca   ugcu  
           | ||  ||| |||| |||||||||   ||  ||||||   |||| c
           c ga  cuc cccc ACCUCCUGC   CG  GUCAGU   gcgg  
-------ccua g  aa   a    G         ---  UU      Ccc    u 


Annotation confidence Not enough data
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Genome context
chr4: 2284058-2284154 [-]

Database links

Mature ptr-miR-943

Accession MIMAT0008349
Description Pan troglodytes ptr-miR-943 mature miRNA
Sequence 59 - CUGACUGUUGCCGUCCUCCAG - 79
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70