miRBase entry: dan-mir-92a

Stem-loop dan-mir-92a


Accession
MI0008949
Description
Drosophila ananassae dan-mir-92a precursor miRNA
Gene family
MIPF0000013; mir-25


Sequence

auacaaauuucccguaggacgggaaggugucaagguuuugaauuaaauuaaaCAUUGCACUUGUCCCGGCCUAUgggcgguuuguca
..(((((((.((((((((.((((((((((.(((.((((...........)))).)))))))).))))).)))))))).)))))))..

Structure
au       u        a     -     u   g    ugaa 
  acaaauu cccguagg cggga aggug caa guuu    u
  ||||||| |||||||| ||||| ||||| ||| ||||    u
  uguuugg gggUAUCC GCCCU UUCAC GUU Caaa    a
ac       c        G     G     -   A    uuaa 


Annotation confidence Not enough data
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Genome context
scaffold_13340: 3727777-3727863 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dan-mir-92a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dan-miR-92a

Accession MIMAT0008412
Description Drosophila ananassae dan-miR-92a mature miRNA
Sequence 53 - CAUUGCACUUGUCCCGGCCUAU - 74
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218