miRBase entry: dan-mir-310

Stem-loop dan-mir-310

Accession

MI0008962

Description

Drosophila ananassae dan-mir-310 precursor miRNA

Gene family

MIPF0000566; mir-310

Sequence

aacauaaacacuugcaggacggggagcgugacaauauauauauuuuauaaacauaUAUUGCACACCUCCCGGCCUAUaaguguaaauguu
(((((..(((((((.(((.(.(((((.(((.((((((((.............)))))))))))..))))).)))).)))))))..)))))

Structure

     aa       c   a g     -c   a        auauu 
aacau  acacuug agg c gggag  gug caauauau     u
|||||  ||||||| ||| | |||||  ||| ||||||||     u
uugua  ugugaaU UCC G CCCUC  CAC GUUAUaua     a
     aa       A   - G     CA   -        caaau

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scaffold_13266: 4133049-4133138 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from dan-mir-310

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dan-miR-310

Accession	MIMAT0008425
Description	Drosophila ananassae dan-miR-310 mature miRNA
Sequence	56 - UAUUGCACACCUCCCGGCCUAU - 77
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218