Stem-loop sequence dan-mir-4

Accession MI0008964
Description Drosophila ananassae miR-4 stem-loop
Gene family MIPF0000305; mir-4
Stem-loop 
 ug    u gu   uu    c   c   cuuag    - uu 
u  caau a  uuc  uggu guc agc     guga c  c
|  |||| |  |||  |||| ||| |||     |||| |   
g  guug u  aag  acca cag ucg     uacu g  u
 gu    c ug   uu    a   a   --aaa    a uc
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Genome context
Coordinates (dana_r1.3_FB2010_03) Overlapping transcripts
scaffold_13266: 9731523-9731603 [+]
intergenic
Clustered miRNAs
< 10kb from dan-mir-4
dan-mir-309 scaffold_13266: 9731113-9731180 [+]
dan-mir-3 scaffold_13266: 9731226-9731298 [+]
dan-mir-286 scaffold_13266: 9731359-9731461 [+]
dan-mir-4 scaffold_13266: 9731523-9731603 [+]
dan-mir-5 scaffold_13266: 9731682-9731748 [+]
dan-mir-6-1 scaffold_13266: 9731820-9731887 [+]
dan-mir-6-2 scaffold_13266: 9731963-9732046 [+]
dan-mir-6-3 scaffold_13266: 9732122-9732197 [+]

Mature sequence dan-miR-4

Accession MIMAT0008427
Sequence

49 -  

auaaagcuagacaaccauuga

 - 69

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Evidence by similarity; MI0000122

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).