miRBase entry: der-mir-316

Stem-loop der-mir-316


Accession
MI0009034
Description
Drosophila erecta der-mir-316 precursor miRNA
Gene family
MIPF0000254; mir-316


Sequence

aaauucuagucgauuUGUCUUUUUCCGCUUACUGGCGuuucauuucaacaacgacaggaaagggaaaaaggcguauucacuaugaguuu
((((((((((.(((.(((((((((((.(((.(((.((((..........)))).)))..)))))))))))))).))).)))).))))))

Structure
      -    c   u           G   -A   G    ucau 
aaauuc uagu gau UGUCUUUUUCC CUU  CUG CGuu    u
|||||| |||| ||| ||||||||||| |||  ||| ||||     
uuugag auca uua gcggaaaaagg gaa  gac gcaa    u
      u    c   u           -   ag   a    caac 


Annotation confidence Not enough data
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Genome context
scaffold_4784: 21318823-21318911 [-]

Database links

Mature der-miR-316

Accession MIMAT0008496
Description Drosophila erecta der-miR-316 mature miRNA
Sequence 16 - UGUCUUUUUCCGCUUACUGGCG - 37
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218