miRBase entry: der-mir-305

Stem-loop der-mir-305


Accession
MI0009067
Description
Drosophila erecta der-mir-305 precursor miRNA
Gene family
MIPF0000158; mir-305


Sequence

caugucuAUUGUACUUCAUCAGGUGCUCUGgugugguccguaacccggcacauguugaaguacacucaauaug
(((((....(((((((((.((.(((((..((.((........))))))))).)).)))))))))....)))))

Structure
     cuAU         U  G     CU  u  ggu 
caugu    UGUACUUCA CA GUGCU  Gg gu   c
|||||    ||||||||| || |||||  || ||    
guaua    acaugaagu gu cacgg  cc ca   c
     acuc         u  a     --  -  aug 


Annotation confidence Not enough data
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Genome context
scaffold_4929: 16344698-16344770 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from der-mir-305
Name Accession Chromosome Start End Strand Confidence




Database links

Mature der-miR-305

Accession MIMAT0008527
Description Drosophila erecta der-miR-305 mature miRNA
Sequence 8 - AUUGUACUUCAUCAGGUGCUCUG - 30
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218