miRBase entry: der-mir-278

Stem-loop der-mir-278


Accession
MI0009071
Description
Drosophila erecta der-mir-278 precursor miRNA
Gene family
MIPF0000155; mir-278


Sequence

guaaugguacggugcgaccggaugaugguucacaacgaccguguccuuuaaacgggUCGGUGGGACUUUCGUCCGUUUguaacgccauuug
..((((((....(((((.(((((((.(((((.((.(((((.(((.......)))))))).))))))).))))))).)))))..))))))..

Structure
gu      acgg     c       u     a  a     g   cc 
  aauggu    ugcga cggauga gguuc ca cgacc ugu  u
  ||||||    ||||| ||||||| ||||| || ||||| |||  u
  uuaccg    augUU GCCUGCU UCAGG GU GCUgg gca  u
gu      --ca     U       U     -  G     -   aa 


Annotation confidence Not enough data
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Genome context
scaffold_4845: 14318920-14319010 [-]

Database links

Mature der-miR-278

Accession MIMAT0008530
Description Drosophila erecta der-miR-278 mature miRNA
Sequence 57 - UCGGUGGGACUUUCGUCCGUUU - 78
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218