miRBase entry: der-mir-87

Stem-loop der-mir-87


Accession
MI0009085
Description
Drosophila erecta der-mir-87 precursor miRNA
Gene family
MIPF0000152; mir-87


Sequence

cauauuucauucgcgccuguaucuugcugaaccguugccauuauggccuacgauccggUUGAGCAAAAUUUCAGGUGUGugagaaauuuguu
((.(((((.(.((((((((.((.(((((.(((((..((((...))))........))))).))))).))..)))))))).).))))).))..

Structure
--  u     a u        -u  c     g     ------uu    u 
  ca auuuc u cgcgccug  au uugcu aaccg        gcca  
  || ||||| | ||||||||  || ||||| |||||        |||| u
  gu uaaag g GUGUGGAC  UA AACGA UUggc        cggu  
uu  u     a u        UU  A     G     cuagcauc    a 


Annotation confidence Not enough data
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Genome context
scaffold_4929: 10570551-10570642 [-]

Database links

Mature der-miR-87

Accession MIMAT0008544
Description Drosophila erecta der-miR-87 mature miRNA
Sequence 59 - UUGAGCAAAAUUUCAGGUGUG - 79
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218