miRBase entry: dgr-mir-287-1

Stem-loop dgr-mir-287-1


Accession
MI0009106
Description
Drosophila grimshawi dgr-mir-287-1 precursor miRNA
Gene family
MIPF0000224; mir-287


Sequence

ugcauaaugcuugaaauuuugcacacauuuacaauauuuguaaaUGUGUUGAAAAUCGUUUGCACaacuguga
.(((...(((.....(((((..((((((((((((...))))))))))))..))))).....)))....)))..

Structure
-u   -uaa   uugaa     gc            u 
  gca    ugc     auuuu  acacauuuacaa  
  |||    |||     |||||  |||||||||||| a
  ugu    ACG     UAAAA  UGUGUaaauguu  
ag   caaC   UUUGC     GU            u 


Annotation confidence Not enough data
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Genome context
scaffold_15252: 13917120-13917192 [+]

Database links

Mature dgr-miR-287

Accession MIMAT0008563
Description Drosophila grimshawi dgr-miR-287 mature miRNA
Sequence 45 - UGUGUUGAAAAUCGUUUGCAC - 65
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218