Stem-loop sequence dgr-mir-3-2

Accession MI0009127
Description Drosophila grimshawi miR-3-2 stem-loop
Gene family MIPF0000140; mir-3
Stem-loop 
--           c  ua    a   --uug  u 
  ugggaugcauu ug  cagu aug     ac c
  ||||||||||| ||  |||| |||     ||  
  acucuguguga ac  guca uac     ug u
aa           a  gg    c   caaaa  u
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Genome context
Coordinates (dgri_r1.3_FB2010_02) Overlapping transcripts
scaffold_5621: 2663-2728 [+]
intergenic
Clustered miRNAs
< 10kb from dgr-mir-3-2
dgr-mir-309-2 scaffold_5621: 2525-2600 [+]
dgr-mir-3-2 scaffold_5621: 2663-2728 [+]
dgr-mir-286-2 scaffold_5621: 2821-2924 [+]
dgr-mir-4-2 scaffold_5621: 2983-3063 [+]
dgr-mir-5-2 scaffold_5621: 3132-3204 [+]
dgr-mir-6-4 scaffold_5621: 3398-3467 [+]
dgr-mir-6-5 scaffold_5621: 3535-3613 [+]
dgr-mir-6-6 scaffold_5621: 3701-3774 [+]

Mature sequence dgr-miR-3

Accession MIMAT0008580
Sequence

43 -  

ucacugggcaaagugugucuca

 - 64

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Evidence by similarity; MI0000121

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).