miRBase entry: dgr-mir-306

Stem-loop dgr-mir-306


Accession
MI0009133
Description
Drosophila grimshawi dgr-mir-306 precursor miRNA
Gene family
MIPF0000313; mir-306


Sequence

cugcUCAGGUACUUAGUGACUCUCAAuucaacauuguauugcacgccuuugagggucgcucugugccuguguug
..((.(((((((..((((((((((((......................))))))))))))..))))))).))..

Structure
cu  U       UU            uucaacauug 
  gc CAGGUAC  AGUGACUCUCAA          u
  || |||||||  ||||||||||||           
  ug guccgug  ucgcugggaguu          a
gu  u       uc            uccgcacguu 


Annotation confidence Not enough data
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Genome context
scaffold_14978: 830926-830999 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from dgr-mir-306
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dgr-miR-306

Accession MIMAT0008592
Description Drosophila grimshawi dgr-miR-306 mature miRNA
Sequence 5 - UCAGGUACUUAGUGACUCUCAA - 26
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218