Stem-loop sequence dgr-mir-4-2

Accession MI0009135
Description Drosophila grimshawi miR-4-2 stem-loop
Gene family MIPF0000305; mir-4
Stem-loop 
 ug    u gu   uu    c   c   cuuag      u 
u  caau a  uuc  uggu guc agc     gugauu c
|  |||| |  |||  |||| ||| |||     |||||| u
g  guug u  aag  acca cag ucg     uacuag c
 gu    c ug   uu    a   a   --aaa      u
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Genome context
Coordinates (dgri_r1.3_FB2010_02) Overlapping transcripts
scaffold_5621: 2983-3063 [+]
intergenic
Clustered miRNAs
< 10kb from dgr-mir-4-2
dgr-mir-309-2 scaffold_5621: 2525-2600 [+]
dgr-mir-3-2 scaffold_5621: 2663-2728 [+]
dgr-mir-286-2 scaffold_5621: 2821-2924 [+]
dgr-mir-4-2 scaffold_5621: 2983-3063 [+]
dgr-mir-5-2 scaffold_5621: 3132-3204 [+]
dgr-mir-6-4 scaffold_5621: 3398-3467 [+]
dgr-mir-6-5 scaffold_5621: 3535-3613 [+]
dgr-mir-6-6 scaffold_5621: 3701-3774 [+]

Mature sequence dgr-miR-4

Accession MIMAT0008594
Sequence

49 -  

auaaagcuagacaaccauuga

 - 69

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Evidence by similarity; MI0000122

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).