miRBase entry: dgr-mir-286-1

Stem-loop dgr-mir-286-1

Accession

MI0009136

Description

Drosophila grimshawi dgr-mir-286-1 precursor miRNA

Gene family

MIPF0000225; mir-286

Sequence

uuaaaauuaaauggcgauugucgguauggucgcuuuugaaccuaaacucuauauacaauauauauaaagUGACUAGACCGAACACUCGUGCUauaauuuuaaaa
(((((((((....((((.(((((((.((((((((((.............................)))))))))).)))).))).))))....)))))))))..

Structure

--         aaug    u   -    a          ugaaccuaaacuc 
  uuaaaauua    gcga ugu cggu uggucgcuuu             u
  |||||||||    |||| ||| |||| ||||||||||             a
  aauuuuaau    UGCU ACA GCCA AUCAGUgaaa             u
aa         aUCG    C   A    G          uauauauaacaua

Annotation confidence Not enough data

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Genome context

scaffold_15112: 2108818-2108921 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from dgr-mir-286-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dgr-miR-286

Accession	MIMAT0008590
Description	Drosophila grimshawi dgr-miR-286 mature miRNA
Sequence	70 - UGACUAGACCGAACACUCGUGCU - 92
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218