Stem-loop sequence dgr-mir-5-2

Accession MI0009175
Description Drosophila grimshawi miR-5-2 stem-loop
Gene family MIPF0000309; mir-5
Stem-loop 
--    -       c               ---  uuca 
  gcua aaaggaa gaucguugugauaug   cg    u
  |||| ||||||| |||||||||||||||   ||     
  cgau uuuccuu uuagugacacuauac   gc    u
cg    a       -               auu  uaaa
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Genome context
Coordinates (dgri_r1.3_FB2010_02) Overlapping transcripts
scaffold_5621: 3132-3204 [+]
intergenic
Clustered miRNAs
< 10kb from dgr-mir-5-2
dgr-mir-309-2 scaffold_5621: 2525-2600 [+]
dgr-mir-3-2 scaffold_5621: 2663-2728 [+]
dgr-mir-286-2 scaffold_5621: 2821-2924 [+]
dgr-mir-4-2 scaffold_5621: 2983-3063 [+]
dgr-mir-5-2 scaffold_5621: 3132-3204 [+]
dgr-mir-6-4 scaffold_5621: 3398-3467 [+]
dgr-mir-6-5 scaffold_5621: 3535-3613 [+]
dgr-mir-6-6 scaffold_5621: 3701-3774 [+]

Mature sequence dgr-miR-5

Accession MIMAT0008570
Sequence

5 -  

aaaggaacgaucguugugauaug

 - 27

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Evidence by similarity; MI0000123

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).