Stem-loop sequence dmo-mir-306

Accession MI0009202
Description Drosophila mojavensis miR-306 stem-loop
Gene family MIPF0000313; mir-306
Stem-loop 
--  u       uu            ucacauau     
  gc cagguac  agugacucucaa        ugcu 
  || |||||||  ||||||||||||        ||| u
  cg guccgug  ucgcugggaguu        acgu 
gc  u       uc            ----ucau
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Genome context
Coordinates (dmoj_r1.3_FB2010_02) Overlapping transcripts
scaffold_6500: 7201957-7202027 [+]
intergenic
Clustered miRNAs
< 10kb from dmo-mir-306
dmo-mir-9c scaffold_6500: 7201345-7201433 [+]
dmo-mir-306 scaffold_6500: 7201957-7202027 [+]
dmo-mir-79 scaffold_6500: 7202139-7202214 [+]
dmo-mir-9b scaffold_6500: 7202307-7202395 [+]

Mature sequence dmo-miR-306-5p

Accession MIMAT0008648
Previous IDs dmo-miR-306
Sequence

3 -  

ucagguacuuagugacucucaa

 - 24

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Evidence by similarity; MI0000414

Mature sequence dmo-miR-306-3p

Accession MIMAT0008649
Previous IDs dmo-miR-306*
Sequence

48 -  

gagggucgcucugugccugugc

 - 69

Get sequence
Evidence by similarity; MI0000414

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).