miRBase entry: dmo-mir-287

Stem-loop dmo-mir-287


Accession
MI0009212
Description
Drosophila mojavensis dmo-mir-287 precursor miRNA
Gene family
MIPF0000224; mir-287


Sequence

aauguuugaaauuuugcacacauuuacaauaauuguaaaUGUGUUGAAAAUCGUUUGCACaa
..(((.....(((((..((((((((((((...))))))))))))..))))).....)))...

Structure
-aa   uugaa     gc            u 
   ugu     auuuu  acacauuuacaa  
   |||     |||||  |||||||||||| a
   ACG     UAAAA  UGUGUaaauguu  
aaC   UUUGC     GU            a 


Annotation confidence Not enough data
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Genome context
scaffold_6500: 21429009-21429070 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dmo-mir-287
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dmo-miR-287

Accession MIMAT0008659
Description Drosophila mojavensis dmo-miR-287 mature miRNA
Sequence 40 - UGUGUUGAAAAUCGUUUGCAC - 60
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218