miRBase entry: dmo-mir-309

Stem-loop dmo-mir-309

Accession

MI0009213

Description

Drosophila mojavensis dmo-mir-309 precursor miRNA

Gene family

MIPF0000140; mir-3

Sequence

auuauaagguaaacuuuguucaguuuugccggguucuauguugugcgcaUCACUGGGUGAAGUUUGUCGUAuaau
((((((.(((((((((((((((((..(((((.(........).)).)))..))))))))))))))))).))))))

Structure

      a                 uu   -  g uuc 
auuaua gguaaacuuuguucagu  ugc cg g   u
|||||| |||||||||||||||||  ||| || |    
uaauAU CUGUUUGAAGUGGGUCA  acg gu u   a
      G                 CU   c  g ugu

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scaffold_6496: 20937119-20937193 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from dmo-mir-309

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dmo-miR-309

Accession	MIMAT0008660
Description	Drosophila mojavensis dmo-miR-309 mature miRNA
Sequence	50 - UCACUGGGUGAAGUUUGUCGUA - 71
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218