miRBase entry: dmo-mir-275

Stem-loop dmo-mir-275

Accession

MI0009217

Description

Drosophila mojavensis dmo-mir-275 precursor miRNA

Gene family

MIPF0000187; mir-275

Sequence

gucuuuuaccgugcgcgcuaaucagugaccggggcugguuucgauuaucucacagUCAGGUACCUGAAGUAGCGCGCGugguggcuagacgc
((((.(((((((((((((((.((((..(((..(((((...............))))).)))..))))..)))))))))))))))..))))..

Structure

--    -u               -a    ug   gg     guuucg 
  gucu  uuaccgugcgcgcua  ucag  acc  ggcug      a
  ||||  |||||||||||||||  ||||  |||  |||||      u
  caga  ggugguGCGCGCGAU  AGUC  UGG  CUgac      u
cg    uc               GA    CA   -A     acucua

Annotation confidence Not enough data

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Genome context

scaffold_6500: 18399400-18399491 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dmo-mir-275

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dmo-miR-275

Accession	MIMAT0008664
Description	Drosophila mojavensis dmo-miR-275 mature miRNA
Sequence	56 - UCAGGUACCUGAAGUAGCGCGCG - 78
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218