miRBase entry: dmo-mir-133

Stem-loop dmo-mir-133


Accession
MI0009231
Description
Drosophila mojavensis dmo-mir-133 precursor miRNA
Gene family
MIPF0000029; mir-133


Sequence

caacgcuguguguaguugguugacaucgggucagaucuguuuuucgagaauUUGGUCCCCUUCAACCAGCUGUagcagugguugau
(((((((((...(((((((((((....(((((((((((........)).)))))).)))..)))))))))))..))))).))))..

Structure
--    -     gug           cauc   -      -  guu 
  caac gcugu   uaguugguuga    ggg ucagau cu   u
  |||| |||||   |||||||||||    ||| |||||| ||    
  guug ugacg   GUCGACCAACU    CCC GGUUua ga   u
ua    g     -aU           --UC   U      a  gcu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_6500: 24707677-24707762 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dmo-mir-133
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dmo-miR-133

Accession MIMAT0008678
Description Drosophila mojavensis dmo-miR-133 mature miRNA
Sequence 52 - UUGGUCCCCUUCAACCAGCUGU - 73
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218