miRBase entry: dmo-mir-124

Stem-loop dmo-mir-124


Accession
MI0009241
Description
Drosophila mojavensis dmo-mir-124 precursor miRNA
Gene family
MIPF0000021; mir-124


Sequence

ucguuugguacguuuuucuccugguauccacuguaggccucuaugaauuuugaccaUAAGGCACGCGGUGAAUGCCAAGagcgaacgaaacucuacaa
..((((.((.((((((.....((((((.((((((..((((.((((.........))))))))..)))))).)))))))))))).)).)))).......

Structure
-----uc    g  a      ucucc      c      ag    c    aau 
       guuu gu cguuuu     ugguau cacugu  gccu uaug   u
       |||| || ||||||     |||||| ||||||  |||| ||||   u
       caaa ca gcgaGA     ACCGUA GUGGCG  CGGA AUac   u
aacaucu    g  a      -----      A      CA    -    cag 


Annotation confidence Not enough data
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Genome context
scaffold_6500: 21419487-21419584 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dmo-mir-124
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dmo-miR-124

Accession MIMAT0008688
Description Drosophila mojavensis dmo-miR-124 mature miRNA
Sequence 57 - UAAGGCACGCGGUGAAUGCCAAG - 79
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218