miRBase entry: dpe-mir-286

Stem-loop dpe-mir-286

Accession

MI0009263

Description

Drosophila persimilis dpe-mir-286 precursor miRNA

Gene family

MIPF0000225; mir-286

Sequence

uuaaaauuaaauggcgauugucgguuuggucgcuuuuuaccaggguuccgaucaagcgaagUGACUAGACCGAACACUCGUGCUauaauuuuagaa
(((((((((....((((.((((((((((((((((((......((...))........))))))))))))))).))).))))....)))))))))..

Structure

--         aaug    u   -               --uuacca  g 
  uuaaaauua    gcga ugu cgguuuggucgcuuu        gg  
  |||||||||    |||| ||| |||||||||||||||        || u
  gauuuuaau    UGCU ACA GCCAGAUCAGUgaag        cc  
aa         aUCG    C   A               cgaacuag  u

Annotation confidence Not enough data

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Genome context

scaffold_2: 8905981-8906076 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from dpe-mir-286

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dpe-miR-286

Accession	MIMAT0008709
Description	Drosophila persimilis dpe-miR-286 mature miRNA
Sequence	62 - UGACUAGACCGAACACUCGUGCU - 84
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218