miRBase entry: dpe-mir-124

Stem-loop dpe-mir-124

Accession

MI0009284

Description

Drosophila persimilis dpe-mir-124 precursor miRNA

Gene family

MIPF0000021; mir-124

Sequence

ucguuugguacguuuuucuccugguauccacuguaggccuauauguauuucgaccaUAAGGCACGCGGUGAAUGCCAAGagcggacgaaacuc
..((((.((.((((((.....((((((.((((((..((((.((((.........))))))))..)))))).)))))))))))).)).))))..

Structure

uc    g  a      ucucc      c      ag    a    uau 
  guuu gu cguuuu     ugguau cacugu  gccu uaug   u
  |||| || ||||||     |||||| ||||||  |||| ||||   u
  caaa ca gcgaGA     ACCGUA GUGGCG  CGGA AUac   c
cu    g  g      -----      A      CA    -    cag

Annotation confidence Not enough data

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Genome context

scaffold_8: 2078730-2078822 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dpe-mir-124

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dpe-miR-124

Accession	MIMAT0008731
Description	Drosophila persimilis dpe-miR-124 mature miRNA
Sequence	57 - UAAGGCACGCGGUGAAUGCCAAG - 79
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218