miRBase entry: dpe-mir-iab-4

Stem-loop dpe-mir-iab-4


Accession
MI0009296
Description
Drosophila persimilis dpe-mir-iab-4 precursor miRNA
Gene family
MIPF0000151; mir-iab-4


Sequence

ucguauACGUAUACUGAAUGUAUCCUGAguguauccuaucCGGUAUACCUUCAGUAUACGUAACacga
((((.(((((((((((((.((((((.((..(....)..)).)).)))).)))))))))))))..))))

Structure
    -a             U    -  U  gu u 
ucgu  uACGUAUACUGAA GUAU CC GA  g a
||||  ||||||||||||| |||| || ||  |  
agca  AUGCAUAUGACUU CAUA GG cu  c u
    CA             C    U  C  au c 


Annotation confidence Not enough data
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Genome context
scaffold_0: 11526573-11526640 [+]

Database links

Mature dpe-miR-iab-4-5p

Accession MIMAT0008740
Description Drosophila persimilis dpe-miR-iab-4-5p mature miRNA
Sequence 7 - ACGUAUACUGAAUGUAUCCUGA - 28
Evidence not_experimental

Mature dpe-miR-iab-4-3p

Accession MIMAT0008741
Description Drosophila persimilis dpe-miR-iab-4-3p mature miRNA
Sequence 41 - CGGUAUACCUUCAGUAUACGUAAC - 64
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218