Stem-loop sequence dpe-mir-306

Accession MI0009319
Description Drosophila persimilis miR-306 stem-loop
Gene family MIPF0000313; mir-306
Stem-loop 
-    uu     cu       uu  u        --   - u 
 cacu  gccgg  cagguac  ag gacucuca  aug c u
 ||||  |||||  |||||||  || ||||||||  ||| |  
 gugg  cgguc  guccgug  uc cugagagu  uac g u
g    --     ac       uc  u        uc   a c
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Genome context
Coordinates (dper_r1.3_FB2010_02) Overlapping transcripts
scaffold_1: 9894939-9895018 [+]
intergenic
Clustered miRNAs
< 10kb from dpe-mir-306
dpe-mir-9c scaffold_1: 9894317-9894408 [+]
dpe-mir-306 scaffold_1: 9894939-9895018 [+]
dpe-mir-79 scaffold_1: 9895123-9895199 [+]
dpe-mir-9b scaffold_1: 9895313-9895403 [+]

Mature sequence dpe-miR-306

Accession MIMAT0008759
Sequence

13 -  

ucagguacuuagugacucucaa

 - 34

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Evidence by similarity; MI0000414

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).