miRBase entry: dse-mir-133

Stem-loop dse-mir-133

Accession

MI0009396

Description

Drosophila sechellia dse-mir-133 precursor miRNA

Gene family

MIPF0000029; mir-133

Sequence

cugcaacgcuguguguagcugguugacaucgggucagaucuguuuuuuaagcauUUGGUCCCCUUCAACCAGCUGUagccagugguugcug
..(((((((((..(((((((((((((....(((((((((((........)).)))))).)))..)))))))))))))..)))).)))))..

Structure

cu     -    ug             cauc   -      -  guu 
  gcaac gcug  uguagcugguuga    ggg ucagau cu   u
  ||||| ||||  |||||||||||||    ||| |||||| ||    
  cguug ugac  aUGUCGACCAACU    CCC GGUUua ga   u
gu     g    cg             --UC   U      c  auu

Annotation confidence Not enough data

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Genome context

scaffold_18: 496883-496973 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dse-mir-133

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dse-miR-133

Accession	MIMAT0008834
Description	Drosophila sechellia dse-miR-133 mature miRNA
Sequence	55 - UUGGUCCCCUUCAACCAGCUGU - 76
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218