miRBase entry: dsi-mir-277

Stem-loop dsi-mir-277


Accession
MI0009415
Description
Drosophila simulans dsi-mir-277 precursor miRNA
Gene family
MIPF0000156; mir-277


Sequence

uugaagguuuugggcugcgugucaggagugcauuugcacugaaacuauccaaagcaugUAAAUGCAUUAUUUGGUACGACAuuccagaacguacaauc
(((.(.((((((((.(((((((((((((((((((((((.((.............)))))))))))))).))))))))).)).)))))))).).)))..

Structure
--   a g        c  -         -            c  aaacu 
  uug a guuuuggg ug cgugucagg agugcauuugca ug     a
  ||| | |||||||| || ||||||||| |||||||||||| ||     u
  aac u caagaccu AC GCAUGGUUU UUACGUAAAUgu ac     c
cu   a g        u  A         A            -  gaaac 


Annotation confidence Not enough data
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Genome context
chr3R: 15450325-15450422 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from dsi-mir-277
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dsi-miR-277

Accession MIMAT0008850
Description Drosophila simulans dsi-miR-277 mature miRNA
Sequence 59 - UAAAUGCAUUAUUUGGUACGACA - 81
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218