miRBase entry: dsi-bantam

Stem-loop dsi-bantam


Accession
MI0009426
Description
Drosophila simulans dsi-bantam precursor miRNA
Gene family
MIPF0000153; bantam


Sequence

auuugacuacgaaaccgguuuucgauuugguuugacuguuuuucauacaagUGAGAUCAUUUUGAAAGCUGAUUuugucaa
........((((((.((((((((((..((((((.(((((.......)).))).))))))..)))))))))).))))))...

Structure
auuugacu      c          uu      g   -  uu 
        acgaaa cgguuuucga  ugguuu acu gu  u
        |||||| ||||||||||  |||||| ||| ||  u
        uguuUU GUCGAAAGUU  ACUAGA Uga ca  c
-----aac      A          UU      G   a  ua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3L: 290550-290630 [+]

Database links

Mature dsi-bantam

Accession MIMAT0008861
Description Drosophila simulans dsi-bantam mature miRNA
Sequence 52 - UGAGAUCAUUUUGAAAGCUGAUU - 74
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218