miRBase entry: dsi-mir-3

Stem-loop dsi-mir-3


Accession
MI0009427
Description
Drosophila simulans dsi-mir-3 precursor miRNA
Gene family
MIPF0000140; mir-3


Sequence

gauccugggaugcaucuugugcaguuauguuccaaucucacaUCACUGGGCAAAGUGUGUCUCAagauc
((((.((((((((((.((((.((((.((((.........)))).)))).)))).)))))))))).))))

Structure
    c          c    g    u    ucc 
gauc ugggaugcau uugu cagu augu   a
|||| |||||||||| |||| |||| ||||   a
cuag ACUCUGUGUG AACG GUCA Uaca   u
    a          A    G    C    cuc 


Annotation confidence Not enough data
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Genome context
chr2R: 14254533-14254601 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from dsi-mir-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dsi-miR-3

Accession MIMAT0008862
Description Drosophila simulans dsi-miR-3 mature miRNA
Sequence 43 - UCACUGGGCAAAGUGUGUCUCA - 64
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218